Conserved domains on BPSS1356 protein with e-value 2.01e-20

The actual alignment of the superfamily DUF849 was detected with superfamily member pfam05853

The genomic regions,transcripts and products, and genomic context of chromosome2

Distribution of 100 BLAST hits on query

Related structure and Multiple alignment of YP_111366

Segment(s) of 3E02_A aligned with query sequence, HSP (High-scoring Segment Pair) = 1

Related structure:3E02_A
Chain A, Crystal Structure Of Protein Of Unknown Function (Duf849) (Yp_555544.1) From Burkholderia Xenovorans Lb400 At 1.90 A Resolution

( This only shows Residues 24 to 67,aligned with residues199 to 242 on gi 53722381 ref YP_111366.1

DUF 849 superfamily is a prokaryotic protein of unknown function

Multiple alignment of protein YP_111366 (score > 100) : 1028 hits in 1028 proteins in 236 species

with total alignment length : 1132

Alignment of the proteins

The result for multi-alignment of the proteins:

http://www.ebi.ac.uk/Tools/es/cgi-bin/clustalw2/result.cgi?tool=clustalw2&jobid=clustalw2-20100602-1729578238&poll=yes

Identical proteins for BPSS1356

The proteins that are identical to the B. pseudomallei BPSS1356 (YP_11136) are:

1) conserved hypothetical protein [Burkholderia pseudomallei 1710a]
2) conserved hypothetical protein [Burkholderia pseudomallei 1710a]
3) conserved hypothetical protein [Burkholderia pseudomallei Pasteur 52237]
4) hypothetical protein Bpse9_33487 [Burkholderia pseudomallei 91]
5) hypothetical protein BpseD_33295 [Burkholderia pseudomallei DM98]
6) conserved hypothetical protein [Burkholderia pseudomallei Pasteur 52237]
7) conserved hypothetical protein [Burkholderia pseudomallei 305]
8) conserved hypothetical protein [Burkholderia pseudomallei 305]
9) hypothetical protein BPSS1356 [Burkholderia pseudomallei K96243]
10) hypothetical protein [Burkholderia pseudomallei K96243]

Protein BPSS1356

Complete sequence of Chromosome 1 B. pseudomallei
Complete sequence of chromosome 2 B. pseudomallei


Chain A structure of DUF849 from B. xenovorans with the accession number YP_555544.1

Cluster protein information on chromosome 2 : CLSK709151
( the protein BPSS1356 is in between choline dehydrogenase (PRK02106 ) and major facilitator transporters (CLSK868007)